Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015927260.1_cds_XP_016475126.1_67085
CDS Infomation

[gene=LOC107796820] [db_xref=GeneID:107796820] [protein=receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2] [protein_id=XP_016475126.1] [location=complement(join(56229..56752,58273..58677,59832..60062,60502..60583))] [gbkey=CDS]
Sequence

ATGTTTTTTGGGTTTACTAGATCATGTTTTTTGTTAGGAGTGACTGAGGGTCTGCCGGAG
ACAGACTCTCTAACTTTACCAGCTCCCTCACCAAAGGGTTCAGGCAAATGTGGAACATTG
TATGTGGCAGAGCCTTTGGATGCATGCTCGACTTTGACTAACAAGATTGAACCAACTAAT
AACTTCACAAAAGATCCATTTGTGCTGATAATTAGGGGTGGATGTAGCTTTGAGGATAAA
GTCAGAAAAGCACAAGCTGCGGGTTTTAAAGCAGCCATTATCTATGACAATGCATATGGT
ACTATTATTCCAATGGCAGGAACCTCTACTGGTGTGAAGATACTCGCACTGTTCGTTTCA
AAAGCTTCTGGAGAAACACTCACAAAATATGCTGGTGACACTGATATGGAAGTATGGATA
ATCCCAAGCTTGGAAAACTCAGCTTGGTCAATCATGGCTACGTCTTTCATTTCATTACTT
GCTATGTCGGCCGTGCTCGGGATGTGTTTCTTTGTTCGCAGACATCATATACGAAGAGAG
AGGCCCCGAGCTTCTCGTGTCCGTGAATTTCATGGGATTAGTAGTCGTTTGGTGAAAGCT
ATGCCAAGTTTGATATTTACATCAGTTGTGGAGGATAATTCTACATCAGTAACATGTGCT
ATATGCCTCGAAGATTATCGTGTGGGAAATAAGCTTAGAGTTCTTCCGTGCCGGCACAAA
TTTCATACTGATTGTGTTGATACTTGGCTGACATCATGGAGAACCTTTTGCCCTGTTTGC
AAACGGGATGCAAGGACTAGCACTGGCGAACCACCAGCATCAGAATATACACCATTGCTT
TCTTCCAGTCTGCGATCTGGATCTTCAATGTCATCTCTAAGGTCATCATTAGCATCATCA
GCAGTAATACATATAGGCACAGGAGCATCTCGATCGCCTTCCGTTTCTCGTTCTCAATCA
ATCTCTAGCTCTCATAACCAGCACTCTCTTTGGTCCTACCACCCGTCACCTCATTTTGCT
ATAAGCCGAAGTTCACTCGACTTTCAAAATGCATCTTCGCAAAGATCTGGTGCATCTTAC
TTAATTTCATCTAACTCATTGGGTTATCCTTCTCTATCACCTCTTAATTCAAGATATATT
GGATCAACAAGTCAGCATCATAACCCACTGTACCACAGTGAGTCAATTACAAGCTTTTCA
CCATTTGTATCAGCTAACTCTCTTCCCGGATGTGAGTCATGA

Peptide Sequence

PEP ID

XP_016475126.1
PEP Infomation

PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2 [Nicotiana tabacum]
Sequence

MFFGFTRSCFLLGVTEGLPETDSLTLPAPSPKGSGKCGTLYVAEPLDACSTLTNKIEPTN
NFTKDPFVLIIRGGCSFEDKVRKAQAAGFKAAIIYDNAYGTIIPMAGTSTGVKILALFVS
KASGETLTKYAGDTDMEVWIIPSLENSAWSIMATSFISLLAMSAVLGMCFFVRRHHIRRE
RPRASRVREFHGISSRLVKAMPSLIFTSVVEDNSTSVTCAICLEDYRVGNKLRVLPCRHK
FHTDCVDTWLTSWRTFCPVCKRDARTSTGEPPASEYTPLLSSSLRSGSSMSSLRSSLASS
AVIHIGTGASRSPSVSRSQSISSSHNQHSLWSYHPSPHFAISRSSLDFQNASSQRSGASY
LISSNSLGYPSLSPLNSRYIGSTSQHHNPLYHSESITSFSPFVSANSLPGCES

Transcript Sequence

Gene sequence data has not been registered.